<div dir="ltr">Saikat,<br><div><br></div><div>This is a problem with the compiler, you can avoid this by switching off compiling this section of code by using the configure option '-noneci.</div><div><br></div><div>Best wishes,</div><div><br></div><div>Andy</div></div><div class="gmail_extra"><br><div class="gmail_quote">On 10 February 2016 at 15:30, <span dir="ltr"><<a href="mailto:pcsm2@iacs.res.in" target="_blank">pcsm2@iacs.res.in</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><u></u>
<div style="font-family:Arial;font-size:14px"><p>
<br>
Dear Andy:<br><br>
Thanks for your advice. The configure goes well now. <br>
The next problem occurs with "make" command.<br>
It comes out with the following error:<br><br>
**************************************************************************************************<br>
$(FC) -c $(FFLAGS) $(F90FLAGS) -O3 fcimc_initialisation.F90<br>
$(FC) -c $(FFLAGS) $(F90FLAGS) -O3 fcimc_output.F90<br>
$(FC) -c $(FFLAGS) $(F90FLAGS) -O3 fcimc_iter_utilities.F90<br>
/tmp/ifortaZkltL.i90: catastrophic error: **Internal compiler error: segmentation violation signal raised** Please report this error along with the circumstances in which it occurred in a Software Problem Report. Note: File and line given may not be explicit cause of this error.<br>
compilation aborted for fcimc_iter_utilities.F90 (code 1)<br>
make[3]: *** [fcimc_iter_utilities.o] Error 1<br><br>
...<br><br>
make[3]: Target `targets' not remade because of errors.<br>
make[3]: Leaving directory `/export/home/iacs/Molpro/src/neci'<br>
make[2]: *** [default] Error 2<br>
make[2]: Leaving directory `/export/home/iacs/Molpro/src/neci'<br>
make[1]: *** [neci] Error 2<br>
make[1]: Leaving directory `/export/home/iacs/Molpro/src'<br>
make: *** [src] Error 2<br><br>
************************************************************************************************************<br><br>
What can be done to make the installation success full. Please suggest.<br><br>
with regards,<span class=""><br>
Saikat<br><br><br>
----- Message from Andy May <<a href="mailto:ajmay81@gmail.com" target="_blank">ajmay81@gmail.com</a>> ---------<br></span>
Date: Tue, 9 Feb 2016 17:43:16 +0000<span class=""><br>
From: Andy May <<a href="mailto:ajmay81@gmail.com" target="_blank">ajmay81@gmail.com</a>><br>
Subject: Re: [molpro-user] Molpro Installation Problem<br></span>
To: Saikat Mukherjee <<a href="mailto:pcsm2@iacs.res.in" target="_blank">pcsm2@iacs.res.in</a>><br>
Cc:</p><div><div class="h5">
<blockquote style="border-left:2px solid blue;margin-left:2px;padding-left:12px" type="cite">
<div dir="ltr">
<div>
<a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">Saikat,</a></div>
<br><div>
<a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">It could be this system kernel is too old for the latest parse objects, please download the patch level 0 tarball, then simply copy from there the file src/parse/parse-Linux-x86_64-i8.o to replace the one you have at the moment.</a></div>
<div>
<a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"> </a></div>
<div>
<a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">Best wishes,</a></div>
<div>
<a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"> </a></div>
<div>
<a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">Andy</a></div>
</div>
<div class="gmail_extra">
<br><div class="gmail_quote">
<a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">On 9 February 2016 at 14:23, <span dir="ltr"><</span></a><a href="mailto:pcsm2@iacs.res.in" target="_blank">pcsm2@iacs.res.in</a>> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div style="font-family:Arial;font-size:14px">
<p>
<a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u>Dear Andy,<br><br>
As you suggested I tried to compile a fortran program (fortran-test.f) with the printed options as:<br><br>
"/export/intel/composerxe-2011.5.220/bin/intel64/ifort -i8 -pc64 -auto -vec-report0 -warn nousage -cxxlib -O0 -lpthread fortran-test.f"<br><br>
It compiled fine giving no error!! The program ran as well. My fortran-test.f contains:<br><br>
" implicit none<br>
integer a<br>
a=1<br>
write(*,*)a<br>
end"<br><br>
Please suggest further.<br><br>
May be the problem comes due to the "parse" thing. I have no clue on this. <br><br>
with best regards, <br>
Saikat<br><br><br>
----- Message from Andy May <</u></a><u><a href="mailto:ajmay81@gmail.com" target="_blank">ajmay81@gmail.com</a>> ---------<br>
Date: Tue, 9 Feb 2016 12:18:21 +0000<br>
From: Andy May <<a href="mailto:ajmay81@gmail.com" target="_blank">ajmay81@gmail.com</a>><br>
Subject: Re: [molpro-user] Molpro Installation Problem<br>
To: <a href="mailto:pcsm2@iacs.res.in" target="_blank">pcsm2@iacs.res.in</a><br>
Cc:</u></p>
<blockquote style="border-left:2px solid blue;margin-left:2px;padding-left:12px" type="cite">
<div dir="ltr">
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">Saikat,</a></u><br><div>
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"> </a></u></div>
<div>
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">The error message gives you a suggestion, can you try compiling a trivial Fortran program using the printed options to see if it shows what the problem is?</a></u></div>
<div>
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"> </a></u></div>
<div>
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">Best wishes,</a></u></div>
<div>
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"> </a></u></div>
<div>
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">Andy</a></u></div>
</div>
<div class="gmail_extra">
<br><div class="gmail_quote">
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank">On 6 February 2016 at 10:58, <span dir="ltr"><</span></a><a href="mailto:pcsm2@iacs.res.in" target="_blank">pcsm2@iacs.res.in</a>> wrote:</u><br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div style="font-family:Arial;font-size:14px">
<p>
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u>Dear Molpro User and Developers:<br><br><span style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:12.8px;background-color:rgb(255,255,255)">We are running molpro 2010 parallely in 4 node of IBM Blade. </span> </u></a></u></p>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:12.8px;background-color:rgb(255,255,255)">
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u>overview of present cluster architecture defined below: <br>
</u></a></u></div>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:12.8px;background-color:rgb(255,255,255)">
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u>total node: 4</u></a></u></div>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:12.8px;background-color:rgb(255,255,255)">
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u>OS: Rocks cluster 64 bit</u></a></u></div>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:12.8px;background-color:rgb(255,255,255)">
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u>network type: tcp/ip</u></a></u></div>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:12.8px;background-color:rgb(255,255,255)">
<br><u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><span><u>But while we are trying to install molpro 2012, it is showing error:</u></span><br><span><u>/export/intel/composerxe-2011.5.220/bin/intel64/ifort -i8 -pc64 -auto<br>
-vec-report0 -warn nousage -cxxlib -O0 -lpthread</u><br><u>"unable to link the perse object using:<br><br>
/export/intel/composerxe-2011.5.220/bin/intel64/ifort -i8 -pc64 -auto<br>
-vec-report0 -warn nousage -cxxlib -O0 -lpthread /export/home/iacs/<br>
Molpro/src/boost-install/lib/libboost_system.a /export/home/iacs/Molpro/<br>
src/boost-install/lib/libboost_thread.a -lrt<br><br>
Please check the compiler is working, flags are correct and all libraries are present<br><br>
failed to determine PARSE<br><br>
Result so far of configure written to CONFIG.errout"<br><br>
Also the CONFIG.errout file has been attached below. <br>
</u></span></a></u></div>
<u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u><span style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:12.8px;background-color:rgb(255,255,255)">Please help us to resolve this issue at your earliest.</span><br><br>
Thanks in advance<br>
Saikat Mukherjee<br>
Senior Research Fellow<br>
Indian Association for the Cultivation<br>
of Science, India</u></a></u></div>
<br><u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u>_______________________________________________<br>
Molpro-user mailing list</u></a><br><u><a href="mailto:Molpro-user@molpro.net" target="_blank">Molpro-user@molpro.net</a></u></u></blockquote>
</div>
</div>
</blockquote>
<br><br><br><u><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u>----- End message from Andy May <</u></a><u><a href="mailto:ajmay81@gmail.com" target="_blank">ajmay81@gmail.com</a>> -----</u></u><br>
</div>
</blockquote>
</div>
</div>
</blockquote>
<br><br><br><a href="mailto:molpro-user@%3Cspan%20index=" target="_blank"><u>----- End message from Andy May <</u></a><u><a href="mailto:ajmay81@gmail.com" target="_blank">ajmay81@gmail.com</a>> -----</u><br></div></div></div>
</blockquote></div><br></div>