error message for mpp run of molpro
Wheeler, Dr M.D.
mdw10 at leicester.ac.uk
Mon Nov 10 18:39:08 GMT 2003
Dear All,
When I submit a job to use multiple smp nodes on our cluster
molpro -n6 filename.com
where filename.com is
***,Ar_benz3;
memory,150,m;
!Define Z-matrix here
geometry ={angstrom;
q1
q2 q1 rqq
q3 q2 rqq q1 90.000
Ar q2 rim q1 theta q3 phi
c1 q2 rcc q1 ccq q3 0.0
c2 q2 rcc q1 ccq q3 60.0
c3 q2 rcc q1 ccq q3 120.0
c4 q2 rcc q1 ccq q3 180.0
c5 q2 rcc q1 ccq q3 240.0
c6 q2 rcc q1 ccq q3 300.0
h1 c1 rch c2 120.0 c3 180.0
h2 c2 rch c3 120.0 c4 180.0
h3 c3 rch c4 120.0 c5 180.0
h4 c4 rch c5 120.0 c6 180.0
h5 c5 rch c6 120.0 c1 180.0
h6 c6 rch c1 120.0 c2 180.0
}
!Variables for geometry set here
rqq= 10.000000
rim= 3.50
theta=0.0
phi = 90.0
rcc= 1.2000
ccq= 90.0
rch= 1.08900
!do mp2 calculation
basis= avdz;
hf; save 2100.2
mp2;
mp4;
ccsd(t);
basis= avtz;
hf; start 2100.2; save 2101.2;
mp2;
mp4;
ccsd(t);
---;
The avdz part of the calculation runs smoothly over 6 processors. the first few lines of the output are:
ARMCI configured for 3 cluster nodes
MPP nodes nproc
kaitain 2
giediprime 2
caladan 2
ga_uses_ma=false, calling ma_init with nominal heap. Any -G option will be ignored.
Primary working directories: /scratchdisk1:/scratchdisk2
Secondary working directories: /scratchdisk2:/scratchdisk1
blaslib=atlas
MPP tuning parameters: Latency= 1000 Microseconds, Broadcast speed= 20 MB/sec
default implementation of scratch files=ga
***,
Including file /usr/local/lib/molpro-mpp-Linux-i686-i4-2002.6/molproi.rc
However, the avtz part of the calculation fails before the SCF stage giving the output at the end of the file:
Eigenvalues of metric
1 0.203E-05 0.271E-05 0.588E-05 0.290E-04 0.557E-04 0.832E-04 0.245E-03 0.308E-03
2 0.164E-06 0.575E-06 0.885E-06 0.153E-05 0.108E-04 0.158E-04 0.327E-04 0.418E-04
3 0.153E-05 0.108E-04 0.158E-04 0.940E-04 0.180E-03 0.263E-03 0.336E-03 0.386E-03
4 0.187E-06 0.669E-06 0.203E-05 0.271E-05 0.588E-05 0.290E-04 0.323E-04 0.628E-04
Contracted 2-electron integrals neglected if value below 1.0D-13
AO integral compression algorithm 1 Integral accuracy 1.0D-13
7080.772 MB (compressed) written to integral file ( 47.6%)
Node minimum: 1109.918 MB, node maximum: 1300.496 MB
NUMBER OF SORTED TWO-ELECTRON INTEGRALS: 244144104. BUFFER LENGTH: 32768
NUMBER OF SEGMENTS: 8 SEGMENT LENGTH: 31992480 RECORD LENGTH: 524288
Memory used in sort: 32.55 MW
arrakis:/martynw/$ tail /home/mattd/laser2/caladan/ar-benz3.out
Creating: host=kaitain, user=mattd,
file=/usr/local/lib/molpro-mpp-Linux-i686-i4-2002.6/molprop_2002_6_athlon_tcgmsg.exe, port=33093
Creating: host=giediprime, user=mattd,
file=/usr/local/lib/molpro-mpp-Linux-i686-i4-2002.6/molprop_2002_6_athlon_tcgmsg.exe, port=33095
Creating: host=caladan, user=mattd,
file=/usr/local/lib/molpro-mpp-Linux-i686-i4-2002.6/molprop_2002_6_athlon_tcgmsg.exe, port=33097
GA ERROR fehler
GA ERROR
Does anyone have any idea what is causing this?? I am using the latest .rpm version of molpro2002.6 for athlon.
Cheers,
Martyn
----------------------------------------------
Dr. Martyn D. Wheeler
Department of Chemistry
University of Leicester
University Road
Leicester, LE1 7RH, UK.
Tel (office): +44 (0)116 252 3985
Tel (lab): +44 (0)116 252 2115
Fax: +44 (0)116 252 3789
Email: martyn.wheeler at le.ac.uk
http://www.le.ac.uk/chemistry/staff/mdw10.html
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