[molpro-user] link problems on new Opteron system (2006.1)

[Kirk Peterson]

Hi,

I'm helping out a colleague in getting molpro2006.1 built on her  
Opteron cluster (PGI 6.02, myrinet).  The link fails with a bunch of  
strange unresolved references coming from things like libc and  
libpthread.  Anyone have any ideas?

thanks in advance,

-Kirk


/usr/local/pgi/linux86-64/6.0/bin/pgf90 -pc 64 -i8 -Mcache_align -I./ 
global -fastsse -Bstatic -o /usr/local/molpro2006.1/bin/mol
_2006_1_i8_x86_64_myrinet.exe molver.o molpro.o -L/usr/local/ 
molpro2006.1/lib -lmolpro -L/usr/local/ga-4-0_myrinet/lib/LINUX64 -
bal -ltcgmsg-mpi -lma -lpario -larmci -L/usr/local/gm/lib64 -lgm - 
lpthread -L/usr/local/mpich-gm/lib -lmpich -L/usr/local/gm/lib
lgm -lgks0 -L/usr/local/pgi/linux86-64/6.0/lib -lacml -L/usr/local/ 
ga-4-0_myrinet/lib/LINUX64 -lglobal -ltcgmsg-mpi -lma -lpario
rmci -L/usr/local/gm/lib64 -lgm -lpthread -L/usr/local/mpich-gm/lib - 
lmpich -L/usr/local/gm/lib64 -lgm -lz
/usr/local/molpro2006.1/lib/libmolpro.a(gecos.o)(.text+0xb6): In  
function `gecos_':
gecos.c: warning: Using 'getpwnam' in statically linked applications  
requires at runtime the shared libraries from the glibc ver
used for linking
/usr/local/molpro2006.1/lib/libmolpro.a(licence.o)(.text+0x1baf): In  
function `get_machine_info_c':
parse.c: warning: Using 'gethostbyname' in statically linked  
applications requires at runtime the shared libraries from the glib
rsion used for linking
/usr/lib64/libpthread.a(pthread_once.o)(.text+0x92): In function  
`clear_once_control':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libpthread.a(pthread_once.o)(.eh_frame+0x12): undefined  
reference to `__gcc_personality_v0'
/usr/lib64/libpthread.a(unwind.o)(.text+0x8b): In function  
`unwind_stop':
: undefined reference to `_Unwind_GetCFA'
/usr/lib64/libpthread.a(unwind.o)(.text+0xb5): In function  
`unwind_stop':
: undefined reference to `_Unwind_GetCFA'
/usr/lib64/libpthread.a(unwind.o)(.text+0x18a): In function  
`__pthread_unwind':
: undefined reference to `_Unwind_ForcedUnwind'
/usr/lib64/libpthread.a(unwind.o)(.text+0x1d8): In function  
`__pthread_unwind_next':
: undefined reference to `_Unwind_ForcedUnwind'
/usr/lib64/libc.a(iofclose.o)(.text+0x206): In function `fclose':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(iofclose.o)(.eh_frame+0x12): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(iofflush.o)(.text+0xf0): In function `fflush':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(iofflush.o)(.eh_frame+0x12): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(iofgets.o)(.text+0x17d): In function `fgets':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(iofgets.o)(.eh_frame+0x12): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(iofputs.o)(.text+0x135): In function `fputs':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(iofputs.o)(.eh_frame+0x12): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(iofread.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(ioftell.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(iofwrite.o)(.text+0x15e): In function `fwrite':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(iofwrite.o)(.eh_frame+0x12): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(ioputs.o)(.text+0x185): In function `puts':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(ioputs.o)(.eh_frame+0x12): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(ioseekoff.o)(.text+0x1ed): In function `_IO_seekoff':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(ioseekoff.o)(.eh_frame+0x12): undefined reference  
to `__gcc_personality_v0'
/usr/lib64/libc.a(ioungetc.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(putchar.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(wfileops.o)(.text+0x59e): In function  
`_IO_wfile_underflow':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(wfileops.o)(.eh_frame+0x12): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(fputc.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(fseek.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(getc.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(rewind.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(fileops.o)(.text+0x3de): In function  
`_IO_new_file_underflow':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(fileops.o)(.text+0x233d): In function  
`_IO_file_fopen':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(fileops.o)(.eh_frame+0x12): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(syslog.o)(.text+0x222): In function `closelog':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(syslog.o)(.text+0x2a7): In function `openlog':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(syslog.o)(.text+0x82a): In function `vsyslog':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(syslog.o)(.text+0x842): In function `vsyslog':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(syslog.o)(.eh_frame+0x12): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(backtrace.o)(.text+0x26): In function  
`backtrace_helper':
: undefined reference to `_Unwind_GetIP'
/usr/lib64/libc.a(backtrace.o)(.text+0x84): In function `backtrace':
: undefined reference to `_Unwind_Backtrace'
/usr/lib64/libc.a(iogetdelim.o)(.eh_frame+0x11): undefined reference  
to `__gcc_personality_v0'
/usr/lib64/libc.a(iosetbuffer.o)(.text+0x13c): In function `setbuffer':
: undefined reference to `_Unwind_Resume'
/usr/lib64/libc.a(iosetbuffer.o)(.eh_frame+0x12): undefined reference  
to `__gcc_personality_v0'
/usr/lib64/libc.a(getchar.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
/usr/lib64/libc.a(putc.o)(.eh_frame+0x11): undefined reference to  
`__gcc_personality_v0'
make: *** [bin/molprop_2006_1_i8_x86_64_myrinet.exe] Error 1