[Molpro-user] Inconsistent memory 2006.1
Andy May
MayAJ1 at cardiff.ac.uk
Fri Sep 19 10:05:54 BST 2008
Yavuz,
Could you please send the input for the job.
Thanks,
Andy
dedey at alumni.bilkent.edu.tr wrote:
> Hi all,
>
> I have problems in running Molpro in parallel. The serial job invoked by
> the command below works fine. When I request a parallel job with the
> second command below I see the 8 compute processes start on the compute
> node but after it enters the MULTI code it dies with the error:
>
> USED MEMORY IN cislow: 22302786 22305334 22305334 22305334
> 22305334 22305334 22305334 22305334
> FREE MEMORY IN cislow: 77697114 77694566 77694566 77694566
> 77694566 77694566 77694566 77694566
> ? Error
> ? Inconsistent memory
> ? The problem occurs in check_address
>
> GA ERROR fehler on processor 0
> CLOSEW FILE 31 NAME=eaf_T3100013063.TMP IMPLEMENTATION=eaf HANDLE= 2
>
>>From the error printed above it is seen that one of the eight compute
> processes tries to allocate a slightly smaller memory. The
> "check_address" mentioned in the error report can be found in the utils.f
> source file. I played with the -m and -G flags to increase and decrease
> the memory, but no success out of tens of trials. Specification of the
> memory from the input file also did not work. Jobs with 2 or 4 or more
> than 8 CPUs also die giving the same error.
>
> Am I missing something obvious? Any ideas?
>
> Thanks in advance...
>
> Yavuz
>
>
> The successfull serial run is with this command in the PBS script:
>
> molpro -I $PWD -W /N/dc/scratch/$USER -d /N/dc/scratch/$USER -o
> YD_WO_M1.mout YD_WO_M1.mlp
>
> The parallel jobs dying are initiated by this command:
>
> molpro -I $PWD -W /N/dc/scratch/$USER -d /N/dc/scratch/$USER -o
> YD_WO_M2.mout -n 8 YD_WO_M2.mlp
>
> Other errors of the same type with different number of cores are:
>
> ITER. MIC NCI NEG ENERGY(VAR) ENERGY(PROJ) ENERGY CHANGE
> GRAD(0) GRAD(ORB) GRAD(CI) STEP TIME
>
> USED MEMORY IN cislow: 11296035 11411293 11411293 11411293
> 11411293 11411293 11411293 11411293 11411293 11411293
> 11411293 11411293 11411293 11411293
> 11411293 11411293
> FREE MEMORY IN cislow: 88703865 88588607 88588607 88588607
> 88588607 88588607 88588607 88588607 88588607 88588607
> 88588607 88588607 88588607 88588607
> 88588607 88588607
> ? Error
> ? Inconsistent memory
> ? The problem occurs in check_address
>
>
> ITER. MIC NCI NEG ENERGY(VAR) ENERGY(PROJ) ENERGY CHANGE
> GRAD(0) GRAD(ORB) GRAD(CI) STEP TIME
>
> USED MEMORY IN cislow: 11296035 11411293 11411293 11411293
> 11411293 11411293 11411293 11411293 11411293 11411293
> 11411293 11411293 11411293 11411293
> 11411293 11411293
> FREE MEMORY IN cislow: 38703865 38588607 38588607 38588607
> 38588607 38588607 38588607 38588607 38588607 38588607
> 38588607 38588607 38588607 38588607
> 38588607 38588607
> ? Error
> ? Inconsistent memory
> ? The problem occurs in check_address
>
> ITER. MIC NCI NEG ENERGY(VAR) ENERGY(PROJ) ENERGY CHANGE
> GRAD(0) GRAD(ORB) GRAD(CI) STEP TIME
>
> USED MEMORY IN cislow: 11296035 11411293 11411293 11411293
> 11411293 11411293 11411293 11411293 11411293 11411293
> 11411293 11411293 11411293 11411293
> 11411293 11411293
> FREE MEMORY IN cislow: 25404025 25288767 25288767 25288767
> 25288767 25288767 25288767 25288767 25288767 25288767
> 25288767 25288767 25288767 25288767
> 25288767 25288767
> ? Error
> ? Inconsistent memory
> ? The problem occurs in check_address
>
> GA ERROR fehler on processor 0
>
>
>
> ||||||||||||||||||||||||||||||||||||||||||||||
>
> Yavuz Dede, Ph.D.
> Theo./Comp. Chem.
>
> IU Bloomington - USA
>
> METU Ankara - TURKEY
>
> ||||||||||||||||||||||||||||||||||||||||||||||
>
>
>
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