[molpro-user] Compiling molpro2009.1 for AMD
Simon Binnie
s.binnie at ucl.ac.uk
Wed Dec 9 12:38:20 GMT 2009
Hi,
I'm trying to track down a very similar problem.
Again molpro 2009.1 (p26) built with pgi version 8.0-6 using the
supplied acml libraries and openmpi-1.3.2. Running on quad-core
Opterons the following jobs seem to just hang with cpu usage still at 100%.
c2h4_ccsdfreq
f12_solve_3c
h2o_cfopt_rhf
c2h4_lccsd
glycine_dflmp2r12
Brgrds,
Simon
Joseph Lane wrote:
> Hi Holger
>
> I have just experienced the same errors compiling molpro 2009.1 (p26) yesterday afternoon. My system is a Nehalem Xeon, parallel mpi build (ga-4.2), Intel 11.1.038 compilers and MKL 10.2.0.013.
>
> The tests that stop are:
>
> cpp.test
> hybrid_dft_ci.test
> tl_so_i.test
> h2f_merge.test
> tlbr_mp2_dft_so.test
>
> I don't have any errors with the h2o_cc2.test but equally it doesn't appear to actually run, instead it just passes through the input and then exits.
>
> The h2odimer_lccsdt1b.test fails with a max error very similar to yours.
>
>
> I do not know what causes these errors but presume that they are only minor and can be ignored.
>
>
>
> Kind regards
>
>
> Jo
>
>
>
>
>
>
>
>
>
>
> ________________________________________
> From: molpro-user-bounces at molpro.net [molpro-user-bounces at molpro.net] On Behalf Of Holger Naundorf [naundorf at chemie.fu-berlin.de]
> Sent: Wednesday, December 09, 2009 4:44 AM
> To: Molpro-user at molpro.net
> Subject: [molpro-user] Compiling molpro2009.1 for AMD
>
> Hello,
> I have built molpro 2009.1 (p26) on an AMD Opteron machine using the
> Intel 11.1 compilers. This Version was serial and not using any external
> BLAS/Lapack. The compiling went without any hitch, but I get several
> tests which fail, namely:
>
> cpp.test
> hybrid_dft_ci.test
> tl_so_i.test
> h2f_merge.test
> tlbr_mp2_dft_so.test
>
> do not give any error message, simply continue running - right now I
> have not noted where exactely they stop, but they stop doing anything
> and just stay at 100% CPU and do not terminate.
>
> h2o_cc2.test
> has some I/O trouble:
>
> h2o_cc2.errout
> READM: RECORD= 6100.7 EXTENSION= 0 OFFSET= 0. ADDRESS=
> 16130. LEN= 47 IMPLEMENTATION=df
> CURRENT WRITTEN FILE LENGTH: 15519.TRYING TO READ UP TO ADDRESS:
> 16177.
> ? Error
> ? Trying to read beyond end of file
> ? The problem occurs in readm
>
> and h2odimer_lccsdt1b.test has a too large error:
>
> Results for job h2odimer_lccsdt1b.test
> ERRORS DETECTED in h2odimer_lccsdt1b.test Max error for
> energy=1.91403464D-06
> PROG E E-EOLD
> LCCSDT-1b0 -152.4901737 -1.68045020D-06
> LCCSD(T0) -152.4900905 -3.77241349D-10
> LCCSDT-1b1 -152.4903618 -1.91403464D-06
> LCCSD(T1) -152.4902679 -3.51633389D-09
> LCCSDT-1b -152.4903951 8.09356806D-07
> LCCSD(T) -152.4903014 -3.28208216D-09
>
>
> LCCSD(T) LCCSDT-1B LCCSD(T) LCCSDT-1B
> LCCSD(T) LCCSDT-1B HF-SCF
> -152.49030144 -152.49039507 -152.49026787 -152.49036177
> -152.49009050 -152.49017366 -152.06213916
>
> Are these bugs other people have already seen and can give some hints
> what might cause them (compiler versions/switches etc)?
>
> Regards,
> Holger Naundorf
>
> --
> Dr. Holger Naundorf naundorf at chemie.fu-berlin.de
> Freie Universität Berlin FB Biologie, Chemie,Pharmazie
> Institut für Chemie Phone (++49)(+30)838-55383
>
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