[molpro-user] Calculation suddendly stops
Ulises Miranda
ulimirandone at gmail.com
Sat Dec 19 02:52:27 GMT 2009
Good evening, dear users.
I am trying to calculate a diatomic molecule at MCSCF/MRCI level. I first
calculated the atomic energy and then I moved to the molecule. When I send
the job for the molecule it starts correctly but suddendly it stops at the
point:
NUMBER OF SORTED TWO-ELECTRON INTEGRALS: 17501927. BUFFER LENGTH:
32768
NUMBER OF SEGMENTS: 1 SEGMENT LENGTH: 17501927 RECORD LENGTH:
524288
Memory used in sort: 18.06 MW
SORT1 READ 219333672. AND WROTE 11960884. INTEGRALS IN 35 RECORDS.
CPU TIME: 31.46 SEC, REAL TIME: 38.12 SEC
and it does not send an error. When checking the calculation status it
changes from "R" to "C". The output file does not mention any error. Two
files are created, the first one is "DimeroSc.e15198", which says:
Exit code -5 signaled from compute040
Killing remote processes...MPI process terminated unexpectedly
Last System Error Message from Task 2:: No such file or directory
[2] [MPI Abort by user] Aborting Program!
Last System Error Message from Task 4:: No such file or directory
[4] [MPI Abort by user] Aborting Program!
forrtl: error (78): process killed (SIGTERM)
forrtl: error (78): process killed (SIGTERM)
forrtl: error (78): process killed (SIGTERM)
DONE
and the other one is "DimeroSc.o15198", whichs says:
----------------------------------------
Begin PBS Prologue Fri Dec 18 19:41:07 CST 2009 1261186867
Job ID: 15198.mgt
Username: i_ks258
Group: unam
Nodes: compute037 compute038 compute039 compute040
End PBS Prologue Fri Dec 18 19:41:07 CST 2009 1261186867
----------------------------------------
/home/unam/i_ks258/molpro_dir
/var/spool/torque/aux//15198.mgt
2:SigIntHandler: interrupt signal was caught: 2
2:SigIntHandler: abort signal was caught: cleaning up: 2
4:SigIntHandler: interrupt signal was caught: 2
4:SigIntHandler: abort signal was caught: cleaning up: 2
3:Terminate signal was sent, status=: 15
6:Terminate signal was sent, status=: 15
5:Terminate signal was sent, status=: 15
1:Terminate signal was sent, status=: 15
7:Terminate signal was sent, status=: 15
----------------------------------------
Begin PBS Epilogue Fri Dec 18 19:47:40 CST 2009 1261187260
Job ID: 15198.mgt
Username: i_ks258
Group: unam
Job Name: DimeroSc
Session: 3714
Limits:
cput=2500:00:00,neednodes=4:ppn=8,nodes=4:ppn=8,walltime=5000:00:00
Resources: cput=00:00:00,mem=8180kb,vmem=101792kb,walltime=00:06:28
Queue: full
Account:
Nodes: compute037 compute038 compute039 compute040
Killing leftovers...
End PBS Epilogue Fri Dec 18 19:47:40 CST 2009 1261187260
----------------------------------------
Could anybody tell me, please, how can I know where the error is?
Thank you very much.
Ulises Miranda Ordoñez
Universidad Nacional Autonoma de Mexico
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