[molpro-user] help needed

Andy May MayAJ1 at cardiff.ac.uk
Tue May 7 08:41:49 BST 2013


I believe Kirk already wrote to you about this:

http://www.molpro.net/pipermail/molpro-user/2013-May/005336.html

suggesting it is likely a lack of disk space, and I agree.

If I run your input file it fails with:

  ? Error
  ? Too few geometry parameters given on zmatrix line
  ? The problem occurs in zmatrix

because when specifying geometry like this you need a line between the 
number of atoms and the start of the atom specifications (normally used 
for a comment), i.e.:

...
  geometry={
    30

   C    -2.453000     2.123700     0.000000
...

After fixing this for me the calculation proceeds with no problem, 
certainly past where your calculation stopped, although I do see:

  CAUTION
  VERY SHORT BOND LENGTHS PRESENT - IS THIS RIGHT?

Best wishes,

Andy

On 07/05/13 08:15, diwaker kumar wrote:
> Respected sir and dear molpro users
>
>   i am a new user to molpro and also beginner to linux/ubuntu system.. i
> am facing this problem as mentioned under
>
>   my molpro details are as under
>
>
>
> i have i7 processor and 16 gb ram machine with 500 gb space. i installed
> linux in a different partition drive of 300 gb space, and done linux
> installation through windows...in a different drive.
> i installed molpro in simple steps
> Ist unzip the binary mpp
> 2ndly run sh command
>   3rd it ask for molpro directory .. which i supplied as molpro
> 4th it ask for bin directory i supplied as iit
> 5th usernamer
> 6th password for token
> 7th molpro installation and token succesfully installed
>    my command line for molpro is
> ./iit/bin/molpto test1.inp
>
> so i run the file and getting that output , so can u plz help me in
> sorting it out ,
>
>   my input file and output is as under
> am running mulliken population analysis on my input file as written below...
>
>   ***, population analysis
>   memory,200,m
>   geometry={
>     30
>    C    -2.453000     2.123700     0.000000
>    C    -2.453000     1.298700     0.000000
>    C    -1.738000     0.886200     0.000000
>    C    -1.023000     1.298700     0.000000
>    C    -1.023000     2.123700     0.000000
>    C    -1.738000     2.536200     0.000000
>    C    -1.738000     3.361200     0.000000
>    O    -2.451600     3.772300     0.000000
>    O    -1.024400     3.772300     0.000000
>    C    -0.312100     3.361200     0.000000
>    C     0.400100     3.772300     0.000000
>    O    -1.738000     0.061200     0.000000
>    C    -0.309400     0.886200     0.000000
>    N    -0.314900     0.102400     0.000000
>    C     0.159500    -0.124400     0.000000
>    C     0.221400    -0.946700     0.000000
>    C     0.965300    -1.304200     0.000000
>    C     1.647200    -0.838100     0.000000
>    C     1.584000    -0.015800     0.000000
>    C     0.840100     0.341700     0.000000
>    C    -0.459200    -1.411400     0.000000
>    C    -0.397400    -2.233700     0.000000
>    C     0.346500    -2.591200     0.000000
>    C     1.027100    -2.126400     0.000000
>    C     1.771000    -2.483900     0.000000
>    C     2.453000    -2.019200     0.000000
>    C     2.389700    -1.195600     0.000000
>    C     0.408400    -3.414800     0.000000
>    C     1.152200    -3.772300     0.000000
>    C     1.832900    -3.306200     0.000000
>   }
>
>   basis=6-311g
>   hf
>   pop;
>   individual
>   and i am getting the following error in my out put..
>
>
>   Eigenvalues of metric
>
>           1 0.129E-07 0.216E-07 0.284E-07 0.697E-07 0.135E-06 0.198E-06
> 0.265E-06 0.324E-06
>           2 0.165E-03 0.953E-03 0.104E-02 0.240E-02 0.308E-02 0.398E-02
> 0.852E-02 0.107E-01
>
>
>   Contracted 2-electron integrals neglected if value below      1.0D-13
>   AO integral compression algorithm  1   Integral accuracy      1.0D-13
>
>       4660.396 MB (compressed) written to integral file ( 35.0%)
>
>
>   NUMBER OF SORTED TWO-ELECTRON INTEGRALS: 1582338135.     BUFFER
> LENGTH:  32768
>   NUMBER OF SEGMENTS:  50  SEGMENT LENGTH:   31998710      RECORD
> LENGTH: 524288
>
>   Memory used in sort:      32.56 MW
>
>   ERROR WRITING        32768 WORDS AT OFFSET 1076006912. TO FILE 4
> IMPLEMENTATION=df   FILE HANDLE=  1016  IERR=******
>   ? Error
>   ? I/O error
>   ? The problem occurs in writew
>
> error at command line is
>
> diwaker at ubuntu:~$ ./iit/bin/molpro guptapop.inp
> tmp = /home/diwaker/pdir//home/diwaker/iit/bin/molpro.exe.p
>   Creating: host=ubuntu, user=diwaker,
>             file=/home/diwaker/iit/bin/molpro.exe, port=45977
>   Creating directory /tmp/diwaker
> Write error in iow_direct_write; fd=16, l=32768, p=903286784; write
> returns -1
> This may indicate a filled disk, or that a disk quota has been exceeded
> forrtl: No space left on device
> forrtl: severe (38): error during write, unit 6, file
> /home/diwaker/guptapop.xml
> Image              PC                Routine            Line        Source
> molpro.exe         000000000465AE2A  Unknown               Unknown  Unknown
> molpro.exe         00000000046599A5  Unknown               Unknown  Unknown
> molpro.exe         0000000004586BE6  Unknown               Unknown  Unknown
> molpro.exe         000000000451AFE5  Unknown               Unknown  Unknown
> molpro.exe         000000000451A7A1  Unknown               Unknown  Unknown
> molpro.exe         000000000457274F  Unknown               Unknown  Unknown
> molpro.exe         0000000002195FB2  Unknown               Unknown  Unknown
> molpro.exe         0000000002198990  Unknown               Unknown  Unknown
> molpro.exe         000000000049BBAE  Unknown               Unknown  Unknown
> molpro.exe         00000000023AC5F6  Unknown               Unknown  Unknown
> molpro.exe         00000000004AF054  Unknown               Unknown  Unknown
> molpro.exe         0000000000CA6484  Unknown               Unknown  Unknown
> molpro.exe         0000000000C9CECF  Unknown               Unknown  Unknown
> molpro.exe         0000000000C9891D  Unknown               Unknown  Unknown
> molpro.exe         00000000004D025C  Unknown               Unknown  Unknown
> molpro.exe         000000000040CEAE  Unknown               Unknown  Unknown
> molpro.exe         000000000040B8E4  Unknown               Unknown  Unknown
> molpro.exe         000000000040335E  Unknown               Unknown  Unknown
> molpro.exe         0000000000400535  Unknown               Unknown  Unknown
> molpro.exe         00000000004004DC  Unknown               Unknown  Unknown
> molpro.exe         000000000466C799  Unknown               Unknown  Unknown
> molpro.exe         00000000004003A9  Unknown               Unknown  Unknown
>    1: interrupt(1)
> WaitAll: No children or error in wait?
> diwaker at ubuntu:~$ clear
>   kindly please help and thanks in advance for ur kind suggestions and help
>
> thanks
> yours sincerely
> Diwaker
> Research Scholar
> School of Basic sciences
> Indian Institute of technology Mandi(H.P)
> +919736660660
> Email Id-:
> diwakerphysics at gmail.com <mailto:diwakerphysics at gmail.com>
> diwakerphysics at yahoo.in <mailto:diwakerphysics at yahoo.in>
>
>
>
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>



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