No subject
Fri Apr 4 12:07:02 BST 2014
Nodes nprocs
currituck 6
.....
memory,7500,M
it means it might request 7500 MWord * 8 *6 = 360000MB = 360 GB of
memory in total. Could you check how much memory do you have on the machine?
Best wishes,
Manhui
Ronald Kasl wrote:
> Thanks, .. the computational chemists told me that they are aware of
> that and that they tried different amount of memory, but the output was
> the same.
>
> ... is there any chance that you can patch the code that it shows by how
> much the memory needs to be increased --- this is what we get now .. the
> guys said that changing one line in the code would fix it , they don't
> want to bother you with it, but I thought that you may want to check on
> that
>
> ** this is what it shows in the output file (see the attachment for more)
> ......
>
> For full I/O caching in triples, increase memory by********* words
> to****** Mword
>
> **
>
> Thanks,
> Ron
>
>
>
> Manhui Wang wrote:
>> Please be aware that the memory directive in the input is in Word (not
>> Byte) per process.
>> For examples the line in your input
>> memory,500,M
>> means you might request 500 MWord of memory per process. When you run it
>> with 8 processes, it might request 500 * 8 *8 = 32GB of memory. If
>> memory allocation in parallel exceeds the total limit, please try
>> reducing the memory or reducing the number of processes.
>>
>> Best wishes,
>> Manhui
>>
>> psc wrote:
>>
>>> Good morning, by any chance does anybody have any experiences with
>>> sudden death of molpro? On our place this happen when runs on 8 cores in
>>> machine with 2*4 cores machine? It runs fine for awhile, but then
>>> suddenly dies ... before the job dies, the machine still have enough
>>> memory and the disk is only 32% filled. Do you have any clues of what
>>> is happening? How do you troubleshoot such problems with molpro? The
>>> computational chemist tried to run same job on 4 cores and the job runs
>>> just fine.
>>>
>>> Thanks!
>>>
>>> This is the last portion of the output file:
>>>
>>> DF-MP2-F12 correlation energies:
>>> --------------------------------
>>> Approx. Singlet Triplet
>>> Ecorr Total Energy
>>> DF-MP2 -2.105468770835
>>> -1.481892024291 -3.587360795125 -1241.433614075391
>>> DF-MP2-F12/3*C(DX,FIX) -3.180235173011
>>> -1.762556768679 -4.942791941690 -1242.789045221956
>>> DF-MP2-F12/3*C(FIX) -3.079029486269
>>> -1.791231138096 -4.870260624365 -1242.716513904631
>>> DF-MP2-F12/3C(FIX) -3.076495219986
>>> -1.793891105189 -4.870386325175 -1242.716639605441
>>>
>>> SCS-DF-MP2 energies (F_SING= 1.20000 F_TRIP= 0.62222 F_PARALLEL=
>>> 0.33333):
>>>
>>> ----------------------------------------------------------------------------
>>>
>>> SCS-DF-MP2 -3.448628673449 -1241.294881953715
>>> SCS-DF-MP2-F12/3*C(DX,FIX) -4.912984197013 -1242.759237477279
>>> SCS-DF-MP2-F12/3*C(FIX) -4.809379202782 -1242.655632483048
>>> SCS-DF-MP2-F12/3C(FIX) -4.807993173879 -1242.654246454144
>>>
>>> Symmetry transformation completed.
>>>
>>> Number of N-1 electron functions: 63
>>> Number of N-2 electron functions: 2016
>>> Number of singly external CSFs: 19467
>>> Number of doubly external CSFs: 189491778
>>> Total number of CSFs: 189511246
>>>
>>> Pair and operator lists are different
>>>
>>> Length of J-op integral file: 163.14 GB
>>> Length of K-op integral file: 113.78 GB
>>> Length of 3-ext integral record: 0.00 MB
>>>
>>> Memory could be reduced to2370.6 Mword without degradation in triples
>>>
>>>
>>> forrtl: error (69): process interrupted (SIGINT)
>>> forrtl: error (69): process interrupted (SIGINT)
>>> forrtl: error (69): process interrupted (SIGINT)
>>> forrtl: error (69): process interrupted (SIGINT)
>>> forrtl: error (69): process interrupted (SIGINT)
>>> forrtl: error (69): process interrupted (SIGINT)
>>> forrtl: error (69): process interrupted (SIGINT)
>>> Image PC Routine Line Source
>>> molprop_2009_1_Li 000000000262888F Unknown Unknown Unknown
>>> molprop_2009_1_Li 00000000025FFB96 Unknown Unknown Unknown
>>> molprop_2009_1_Li 000000000219B509 Unknown Unknown Unknown
>>> molprop_2009_1_Li 000000000219C545 Unknown Unknown Unknown
>>> molprop_2009_1_Li 000000000219F48D Unknown Unknown Unknown
>>> molprop_2009_1_Li 000000000171D1F7 Unknown Unknown Unknown
>>> molprop_2009_1_Li 00000000017184C5 Unknown Unknown Unknown
>>> molprop_2009_1_Li 00000000004BAD99 Unknown Unknown Unknown
>>> molprop_2009_1_Li 00000000004B5AE5 Unknown Unknown Unknown
>>> molprop_2009_1_Li 000000000043DD2C Unknown Unknown Unknown
>>> libc.so.6 00007F91CAF48ABD Unknown Unknown Unknown
>>> molprop_2009_1_Li 000000000043DC29 Unknown Unknown Unknown
>>> [0]0:Return code = 0, signaled with Killed
>>> [0]1:Return code = 1
>>> [0]2:Return code = 1
>>> [0]3:Return code = 1
>>> [0]4:Return code = 1
>>> [0]5:Return code = 1
>>> [0]6:Return code = 1
>>> [0]7:Return code = 1
>>>
>>> _______________________________________________
>>> Molpro-user mailing list
>>> Molpro-user at molpro.net
>>> http://www.molpro.net/mailman/listinfo/molpro-user
>>>
>>
--
-----------
Manhui Wang
School of Chemistry, Cardiff University,
Main Building, Park Place,
Cardiff CF10 3AT, UK
Telephone: +44 (0)29208 76637
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